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ILCI CACCIA Method Requests #12

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merged 6 commits into from
Nov 8, 2023
Merged

ILCI CACCIA Method Requests #12

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e578584
Add filter method for site IDs
btmonier Nov 1, 2023
551759e
Version bump
btmonier Nov 1, 2023
ac908a9
Add merging methods for multiple genotype tables
btmonier Nov 1, 2023
03043df
Add tests
btmonier Nov 6, 2023
189f994
Add tests
btmonier Nov 8, 2023
ceffee7
Add news items
btmonier Nov 8, 2023
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2 changes: 1 addition & 1 deletion DESCRIPTION
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Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
Package: rTASSEL
Version: 0.9.32
Version: 0.9.33
Date: 2018-12-21
Title: R Front-End for TASSEL
Authors@R: c(
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2 changes: 2 additions & 0 deletions NAMESPACE
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Expand Up @@ -9,6 +9,7 @@ export(concatenate)
export(createTree)
export(distanceMatrix)
export(exportGenotypeTable)
export(filterGenotypeTableBySiteName)
export(filterGenotypeTableSites)
export(filterGenotypeTableTaxa)
export(genomicPrediction)
Expand All @@ -22,6 +23,7 @@ export(ldJavaApp)
export(ldPlot)
export(linkageDiseq)
export(mds)
export(mergeGenotypeTables)
export(pca)
export(plotManhattan)
export(plotManhattanQC)
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4 changes: 4 additions & 0 deletions NEWS
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@@ -1,5 +1,9 @@
# CHANGES IN VERSION 0.9.33
* Fixed typo in `plotPCA()` error message
* Add new function `filterGenotypeTableBySiteName()`:
+ Filters genotype tables using literal marker names/IDs
* Add new function `mergeGenotypeTables()`:
+ Merges multiple genotype tables by site values

# CHANGES IN VERSION 0.9.32
* Updated `tableReport()` method dispatch for all `AssociationResults`
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4 changes: 4 additions & 0 deletions NEWS.md
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@@ -1,5 +1,9 @@
# rTASSEL 0.9.33
* Fixed typo in `plotPCA()` error message
* Add new function `filterGenotypeTableBySiteName()`:
+ Filters genotype tables using literal marker names/IDs
* Add new function `mergeGenotypeTables()`:
+ Merges multiple genotype tables by site values


# rTASSEL 0.9.32
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