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@AndreasHeger AndreasHeger released this 28 Jul 20:06
· 471 commits to master since this release
v0.15.3
859b76f
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Release 0.15.3

Bugfix release.

  • [#824] allow reading of UTF-8 encoded text in VCF/BCF files.
  • [#780] close all filehandles before opening new ones in pysam_dispatch
  • [#773] do not cache VariantRecord.id to avoid memory leak
  • [#781] default of multiple_iterators=True is changed to False for
    CRAM files.
  • [#825] fix collections.abc import
  • [#825] use bcf_hdr_format instead of bcf_hdr_fmt_text, fix memcpy
    bug when setting FORMAT fields.
  • [#804] Use HTSlib's kstring_t, which reallocates and enlarges its
    memory as needed, rather than a fixed-size char buffer.
  • [#814] Build wheels and upload them to PyPI
  • [#755] Allow passing flags and arguments to index methods
  • [#763] Strip \0 in header check
  • [#761] Test Tabix index contents, not the compression
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