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pysam-0.14.1

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@AndreasHeger AndreasHeger released this 20 Mar 23:15
· 605 commits to master since this release

Release 0.14.1

This is predominantly a bugfix release, though bcftools has now also been
upgraded to 1.7.0.

  • [#621] Add a warning to count_coverage when an alignment has an
    empty QUAL field
  • [#635] Speed-up of AlignedSegment.find_intro()
  • treat border case of all bases in pileup column below quality score
  • [#634] Fix access to pileup reference_sequence