Merge pull request #309 from odoublewen/patch-1

Update calignmentfile.pyx
pysam-developers · Jul 1, 2016 · c66e086 · c66e086
2 parents 6ad7dd1 + 808d887
commit c66e086
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/pysam/calignmentfile.pyx b/pysam/calignmentfile.pyx
@@ -589,7 +589,7 @@ cdef class AlignmentFile:
                 raise ValueError(
                     ("file has no sequences defined (mode='%s') - "
                      "is it SAM/BAM format? Consider opening with "
-                     "check_seq=True") % mode)
+                     "check_sq=False") % mode)
 
         if self.htsfile == NULL:
             raise IOError("could not open file `%s`" % filename )