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Merge branch 'dev' into dev
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LaurenceKuhl committed Sep 19, 2024
2 parents e8c2b56 + a9b3b78 commit 05c4d56
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2 changes: 0 additions & 2 deletions bin/BAGEL.py
Original file line number Diff line number Diff line change
Expand Up @@ -587,15 +587,13 @@ def calculate_bayes_factors(
coreEss = []

with open(essential_genes) as fin:
# skip_header = fin.readline()
for line in fin:
coreEss.append(line.rstrip().split("\t")[0])
coreEss = np.array(coreEss)
print("Number of reference essentials: " + str(len(coreEss)))

nonEss = []
with open(non_essential_genes) as fin:
# skip_header = fin.readline()
for line in fin:
nonEss.append(line.rstrip().split("\t")[0])

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Binary file modified docs/images/crisprseq_metropmap_all.png
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