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🛠️ RNASeQC Updates #56

Merged
merged 1 commit into from
Jun 17, 2024
Merged

🛠️ RNASeQC Updates #56

merged 1 commit into from
Jun 17, 2024

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migbro
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@migbro migbro commented Jun 14, 2024

Description

  • Updated RNASeQC to satisfy https://d3b.atlassian.net/browse/BIXU-3684 while remaining compatible with current prod workflow
  • Added to STAR Dipoid Wf (will not test)
  • Created "dev" workflow so that Ops can tar ball counts to match current prod behavior

Fixes # (issue)

Type of change

Please delete options that are not relevant.

  • Bug fix (non-breaking change which fixes an issue)
  • New feature (non-breaking change which adds functionality)
  • Breaking change (fix or feature that would cause existing functionality to not work as expected)
  • This change requires a documentation update

How Has This Been Tested?

Please describe the tests that you ran to verify your changes. Provide instructions so we can reproduce. Please also list any relevant details for your test configuration

Test Configuration:

  • Environment:
  • Test files:

Checklist:

  • My code follows the style guidelines of this project
  • I have performed a self-review of my own code
  • I have commented my code, particularly in hard-to-understand areas
  • I have made corresponding changes to the documentation
  • My changes generate no new warnings
  • I have added tests that prove my fix is effective or that my feature works
  • New and existing unit tests pass locally with my changes
  • Any dependent changes have been merged and published in downstream modules
  • I have checked my code and corrected any misspellings
  • I have committed any related changes to the PR

🎉 created dev wf to run rnseqc for CFDE project
🔨 added rnaseqc to diploid wf
@migbro migbro added enhancement New feature or request bix-dev This issue or pull request is bix-dev work labels Jun 14, 2024
@migbro migbro self-assigned this Jun 14, 2024
@migbro migbro merged commit 3228864 into master Jun 17, 2024
1 check passed
@migbro migbro deleted the feature/mb-update-rnaseqc branch June 17, 2024 15:14
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3 participants