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Merge branch 'master' of github.com:fhcrc/taxtastic #47

Merge branch 'master' of github.com:fhcrc/taxtastic

Merge branch 'master' of github.com:fhcrc/taxtastic #47

Workflow file for this run

---
name: Run tests and deploy to registry
on:
push:
branches:
- "*"
tags:
- "v*.*.*"
pull_request:
branches:
- "master"
schedule:
- cron: '0 6 15 * *' # 15th of each month at 6am
env:
REGISTRY: ghcr.io
IMAGE_NAME: ${{ github.repository }}
jobs:
unittests:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.8", "3.9", "3.10", "3.11"]
steps:
- name: Checkout repository
uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install package and dependencies
run: |
python -m pip install --upgrade pip wheel
python -m pip install .
- name: Run tests
run: |
python -m unittest discover
taxit -v new_database
deploy:
if: github.ref_type == 'tag'
needs: [unittests]
runs-on: ubuntu-latest
steps:
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3
- name: Log into registry ${{ env.REGISTRY }}
uses: docker/login-action@v3
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}
- name: Extract Docker metadata
id: meta
uses: docker/metadata-action@v5
with:
images: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}
- name: Build and push
id: build-and-push
uses: docker/build-push-action@v6
with:
annotations: ${{ steps.meta.outputs.annotations }}
build-args: VERSION=${{ steps.meta.outputs.version }}
cache-from: type=gha
cache-to: type=gha,mode=max
labels: ${{ steps.meta.outputs.labels }}
push: true
tags: ${{ steps.meta.outputs.tags }}