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ruby gem for analyzing miniprot protein to genome alignments.

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miniprot-ruby-gem

  • a ruby gem for the parsing and extraction of the miniprot alignments to extract locus specific, ids specific, and score and iters.
  • How to run this

align the genome to the proteome using the miniprot and then run this. Sample files from the miniprot alignment are present.

 locus("/home/gaurav/Desktop/full_table.tsv", "ids")

Gaurav Sablok
University of Potsdam
Potsdam,Germany