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Releases: aehrc/VariantSpark

v0.5.3

04 Sep 23:51
89108aa
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  • #221 Automatic selection of the split count threshold selection for p-value calculation
  • #222 updated a notebook named examples/compute_local_fdr.ipynb
  • #223 added more notebook examples under cloud/databricks/notebooks-databricks-azure/*.ipynb
  • #238 Accepted BGZ file as input. A scala method of loading VCF to RDD is updated here.
  • #239 removed redundant and broken hail dependency from pom.xml

v0.5.2

07 Sep 04:06
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Release v0.5.2 includes:

  • Hail init enhancement

v0.5.1

01 Sep 04:03
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Release v0.5.1 includes:

  • Hail init fix

v0.5.0

15 Jul 07:19
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Release v0.5.0 includes:

  • #201, #208 Implements p-value calculation from python
  • #193 Make the covariate calculation part of RF
  • #200 Migrate to Spark 3.1

v0.4.0

17 Nov 23:28
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Release 0.4.0 includes:

  • #205 Add split variable count to hail output
  • #131 Update Hail 0.2 support

v0.3.0

03 Feb 00:48
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Release 0.3.0 includes:

  • #131 Add support for Hail 0.2 (currently supported version is 0.2.16)
  • #137 GRCh38 reference genome with Hail based Variant Spark
  • #132 Migrate to spark 2.4.4
  • #139 Handling of missing genotype calls

v0.2.0

08 Nov 00:52
3f470f0
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Release 0.2.0

v0.2.0-b1

06 Jun 20:35
fe8fcc9
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v0.2.0-b1 Pre-release
Pre-release

Beta release

v0.2.0-a1

13 Jul 02:44
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v0.2.0-a1 Pre-release
Pre-release

Alpha 1 of 0.2.0 release.