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conda_cron

conda_cron #69

Workflow file for this run

name: "conda_cron"
on:
workflow_dispatch:
schedule:
# At 07:00 UTC every day
- cron: "0 7 * * *"
concurrency:
group: "${{ github.workflow }}-${{ github.ref }}"
cancel-in-progress: true
defaults:
run:
shell: bash -leo pipefail {0}
jobs:
condacheck:
runs-on: ${{ matrix.OS }}
name: "daily conda check"
strategy:
fail-fast: false
matrix:
os: ['ubuntu-latest', 'macos-latest', 'macos-12']
python-version:
- "3.9"
- "3.10"
- "3.11"
- "3.12"
exclude:
- os: 'macos-latest'
python-version: '3.9'
steps:
- name: Setup Micromamba
uses: mamba-org/setup-micromamba@v1
with:
micromamba-binary-path: ~/.local/bin/micromamba
environment-name: openfe
create-args: >-
python=${{ matrix.python-version }}
pip
jq
condarc: |
channels:
- jaimergp/label/unsupported-cudatoolkit-shim
- conda-forge
init-shell: bash
- name: "Install openfe + optional deps"
run: |
# get latest version from conda-forge
LATEST_VERSION=$(micromamba search --json openfe | jq '.result.pkgs[0].version')
echo "LATEST_VERSION: $LATEST_VERSION"
# Removing the quotes from the vesrion number
# https://mywiki.wooledge.org/BashGuide/Parameters#Parameter_Expansion
micromamba install openfe=${LATEST_VERSION//\"} pytest -c conda-forge
python -m pip install pytest-xdist
- name: "env info"
run: |
micromamba info
micromamba list
pip list
- id: run-tests
name: "Run tests"
run: |
# note: this only runs the fast tests
pytest -n auto --pyargs openfe openfecli