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@HeilemannLab

HeilemannLab

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  1. ImageSumming ImageSumming Public

    workflow addon for DeepSTORM2D in ZeroCostDL4Mic with experimental data input

    Jupyter Notebook 3

  2. Lama Lama Public

    LocAlization Microscopy Analyzer

    Cython 2 1

  3. SPTAnalyser SPTAnalyser Public

    Batch processing of single particle tracking data, MSD-analysis, hidden markov modeling, transition counting

    Python 2 1

  4. pyErmine pyErmine Public

    Estimate Reaction-rates by Markov-based Investigation of Nanoscopy Experiments (ermine) using Python.

    Python 2 1

  5. k-distance-graph k-distance-graph Public

    Estimate epsilon for DBSCAN with k-distance graphs

    Python 2

  6. NearestNeighborSML NearestNeighborSML Public

    Investigation of (nearest) neighbor distributions of single molecule localizations in cells.

    Jupyter Notebook 1

Repositories

Showing 10 of 15 repositories
  • SPTAnalyser Public

    Batch processing of single particle tracking data, MSD-analysis, hidden markov modeling, transition counting

    HeilemannLab/SPTAnalyser’s past year of commit activity
    Python 2 GPL-3.0 1 0 0 Updated Sep 10, 2024
  • SingleCellImageQuant Public

    fast image-based quantification from confocal microscopy images using Fiji

    HeilemannLab/SingleCellImageQuant’s past year of commit activity
    ImageJ Macro 0 GPL-3.0 0 0 0 Updated Jul 8, 2024
  • ClusterQuantification Public
    HeilemannLab/ClusterQuantification’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Nov 9, 2023
  • Lama Public

    LocAlization Microscopy Analyzer

    HeilemannLab/Lama’s past year of commit activity
    Cython 2 GPL-3.0 1 0 0 Updated Sep 28, 2023
  • SMLM-ROI_tool Public
    HeilemannLab/SMLM-ROI_tool’s past year of commit activity
    Python 0 0 0 0 Updated Sep 18, 2023
  • PANELpy Public Forked from WeisongZhao/PANELpy

    Official Python implementation of the "PANEL" -v0.4.6

    HeilemannLab/PANELpy’s past year of commit activity
    Python 0 ODbL-1.0 2 0 0 Updated Mar 6, 2023
  • ImageSumming Public

    workflow addon for DeepSTORM2D in ZeroCostDL4Mic with experimental data input

    HeilemannLab/ImageSumming’s past year of commit activity
    Jupyter Notebook 3 GPL-3.0 0 1 0 Updated Nov 16, 2022
  • pyErmine Public

    Estimate Reaction-rates by Markov-based Investigation of Nanoscopy Experiments (ermine) using Python.

    HeilemannLab/pyErmine’s past year of commit activity
    Python 2 GPL-3.0 1 0 0 Updated Aug 28, 2022
  • ermine-tutorial Public

    Tutorials for the analysis of single-particle tracking data with pyErmine

    HeilemannLab/ermine-tutorial’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated Sep 22, 2021
  • k-distance-graph Public

    Estimate epsilon for DBSCAN with k-distance graphs

    HeilemannLab/k-distance-graph’s past year of commit activity
    Python 2 GPL-3.0 0 0 0 Updated May 17, 2021
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