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macOS installation README update + minor refactor (#81)
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* Updated macOS installation steps in README [no ci]

* Refactored installation steps for all OS in README [no ci]
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andreped committed Aug 14, 2023
1 parent 71f9b66 commit 601dc12
Showing 1 changed file with 11 additions and 12 deletions.
23 changes: 11 additions & 12 deletions README.md
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Expand Up @@ -26,8 +26,8 @@ To install FastPathology, follow the instructions for your operating system:
*Note: Windows might prompt you with a security warning, to proceed you must press "More info" followed by "Run anyway".*
* Run **fastpathology** from your start menu.
* To **uninstall** the application, go to start menu -> remove programs -> find fastpathology and select uninstall.
Optionally you can also delete your C:/Users/"your username"/fastpathology/ which includes stored project results, pipelines and models.
And the folder C:/ProgramData/FAST/ which contains a cache.
Optionally you can also delete your `C:/Users/"your username"/fastpathology/` which includes stored project results, pipelines, and models.
And the folder `C:/ProgramData/FAST/` which contains a cache.

</details>

Expand All @@ -46,7 +46,7 @@ To install FastPathology, follow the instructions for your operating system:
```bash
sudo dpkg -i fastpathology_ubuntu*.deb
```
* Go to the folder /opt/fastpathology/bin and run the **fastpathology** executable, or run it from the ubuntu menu (windows button->type fastpathology).
* Go to the folder `/opt/fastpathology/bin/` and run the **fastpathology** executable, or run it from the ubuntu menu (`windows button->type fastpathology`).
* To **uninstall** the application, run the following in your terminal:
```bash
sudo apt remove fastpathology
Expand All @@ -70,16 +70,15 @@ rm -Rf $HOME/FAST
```bash
brew install openslide libomp
```
* Download the tar.xz package from the [release page](https://github.com/AICAN-Research/FAST-Pathology/releases/).
* Extract the archive to somewhere on your drive
* Disable the gatekeeper from your terminal:
```bash
sudo spctl --master-disable
```
* Go to extracted folder and find the bin folder and run the executable **fastpathology**.
* Download and run the macOS installer (.dmg) from the [release page](https://github.com/AICAN-Research/FAST-Pathology/releases/).
* In the installer, drag-and-drop the `FastPathology` bundle to the `Applications` directory.
* When the copy is finished, double-click the `Applications` icon in the installer and right-click + open `FastPathology` from the Applications menu.
* A warning should be prompted `"macOS cannot verify the developer of FastPathology (...)"`, click `open` and the program should launch.

*Note: This is only required to be done once. For all future usage, launch FastPathology as a regular App bundle.*
* To **uninstall** the application, delete the extracted folder.
Optionally, you can also delete the /Users/"your username"/fastpathology folder, which includes stored project results, pipelines and models.
And the folder /Users/"your username"/FAST which contains a cache.
Optionally, you can also delete the `/Users/"your username"/fastpathology/` folder, which includes stored project results, pipelines, and models.
And the folder `/Users/"your username"/FAST/` which contains a cache.

</details>

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