{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":24727800,"defaultBranch":"master","name":"vg","ownerLogin":"vgteam","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2014-10-02T16:54:27.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/15925452?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1727118476.0","currentOid":""},"activityList":{"items":[{"before":"8d35cdb7ba8101ea52a4c7b48ca9b4f9ae4f922d","after":"d6ea214be873eef2c9bb648e5ea1ed308396d4a1","ref":"refs/heads/master","pushedAt":"2024-09-23T19:06:37.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"adamnovak","name":"Adam Novak","path":"/adamnovak","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5062495?s=80&v=4"},"commit":{"message":"Merge pull request #4407 from vgteam/codenames\n\nAdd more codenames","shortMessageHtmlLink":"Merge pull request #4407 from vgteam/codenames"}},{"before":"08fa6e540ae979ea1d428ba4d4cfd70ac96de6a2","after":"3761e14bd2f2198cadb91780007ec491457c24e8","ref":"refs/heads/gh-pages","pushedAt":"2024-09-23T18:44:42.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"adamnovak","name":"Adam Novak","path":"/adamnovak","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5062495?s=80&v=4"},"commit":{"message":"Commit new auto-generated docs","shortMessageHtmlLink":"Commit new auto-generated docs"}},{"before":null,"after":"d4493aa566d94cbf93eb107e1dd3759e4e2084d1","ref":"refs/heads/kojix2-elfutils","pushedAt":"2024-09-23T18:41:48.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"adamnovak","name":"Adam Novak","path":"/adamnovak","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5062495?s=80&v=4"},"commit":{"message":"Merge remote-tracking branch 'origin/master' into kojix2-elfutils","shortMessageHtmlLink":"Merge remote-tracking branch 'origin/master' into kojix2-elfutils"}},{"before":"c78dce76ed83832f2e6d37e7b98d65992163e612","after":"1a9fd574f4e44415f6e52d2e9f0a2024db14b96b","ref":"refs/heads/path-normalize","pushedAt":"2024-09-23T18:37:43.000Z","pushType":"push","commitsCount":11,"pusher":{"login":"adamnovak","name":"Adam Novak","path":"/adamnovak","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5062495?s=80&v=4"},"commit":{"message":"Merge remote-tracking branch 'origin/master' into path-normalize","shortMessageHtmlLink":"Merge remote-tracking branch 'origin/master' into path-normalize"}},{"before":"096627db36d9275726a6c77f391f67412ae594bd","after":"8d35cdb7ba8101ea52a4c7b48ca9b4f9ae4f922d","ref":"refs/heads/master","pushedAt":"2024-09-23T18:36:05.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"adamnovak","name":"Adam Novak","path":"/adamnovak","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5062495?s=80&v=4"},"commit":{"message":"Merge pull request #4402 from vgteam/stop-patching-kff-cmake\n\nRemove no-longer-needed kff CMake patching","shortMessageHtmlLink":"Merge pull request #4402 from vgteam/stop-patching-kff-cmake"}},{"before":null,"after":"c4e40f5f8dcf5f5b22ecfb24fb62b8a4be5a4170","ref":"refs/heads/codenames","pushedAt":"2024-09-23T18:35:34.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"adamnovak","name":"Adam Novak","path":"/adamnovak","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5062495?s=80&v=4"},"commit":{"message":"Add more codenames","shortMessageHtmlLink":"Add more codenames"}},{"before":"b2b2ea955fac68e6696e5dfee815dcbe0dccc727","after":"5041ff492155416e0cd333a96a8bf2f1e9aceefe","ref":"refs/heads/lr-giraffe","pushedAt":"2024-09-22T14:25:06.000Z","pushType":"push","commitsCount":14,"pusher":{"login":"xchang1","name":"Xian Chang","path":"/xchang1","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34357324?s=80&v=4"},"commit":{"message":"Lower default max-dp-cells","shortMessageHtmlLink":"Lower default max-dp-cells"}},{"before":"7bdac117184b8f798177b853a8e9aedc258c5076","after":"08fa6e540ae979ea1d428ba4d4cfd70ac96de6a2","ref":"refs/heads/gh-pages","pushedAt":"2024-09-19T19:14:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"adamnovak","name":"Adam Novak","path":"/adamnovak","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5062495?s=80&v=4"},"commit":{"message":"Commit new auto-generated docs","shortMessageHtmlLink":"Commit new auto-generated docs"}},{"before":"22039a119a4d7dc21e47b29ae3365d6310397459","after":null,"ref":"refs/heads/looping_distance_bug","pushedAt":"2024-09-19T19:12:19.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"xchang1","name":"Xian Chang","path":"/xchang1","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34357324?s=80&v=4"}},{"before":"818ee2c4eb9a4b793a7e9763a50561d22ac6e00f","after":"096627db36d9275726a6c77f391f67412ae594bd","ref":"refs/heads/master","pushedAt":"2024-09-19T19:12:12.000Z","pushType":"pr_merge","commitsCount":8,"pusher":{"login":"xchang1","name":"Xian Chang","path":"/xchang1","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34357324?s=80&v=4"},"commit":{"message":"Merge pull request #4395 from vgteam/looping_distance_bug\n\nLooping distance bug","shortMessageHtmlLink":"Merge pull request #4395 from vgteam/looping_distance_bug"}},{"before":null,"after":"e49db317e080763e29bdd651166293d71ca59ee8","ref":"refs/heads/stop-patching-kff-cmake","pushedAt":"2024-09-19T14:42:38.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"adamnovak","name":"Adam Novak","path":"/adamnovak","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5062495?s=80&v=4"},"commit":{"message":"Remove no-longer-needed kff CMake patching\n\nThe upstream problem we're working around was fixed in https://github.com/Kmer-File-Format/kff-cpp-api/commit/2a5ede6a11bde054f5304e95b69252e9cdfb7e0b, and manually editing the CMakeLists.txt upsets git when we go to change submodule versions.","shortMessageHtmlLink":"Remove no-longer-needed kff CMake patching"}},{"before":"beec239f433fcc7614413450c24029a4b1b84a29","after":"b2b2ea955fac68e6696e5dfee815dcbe0dccc727","ref":"refs/heads/lr-giraffe","pushedAt":"2024-09-18T20:01:00.000Z","pushType":"push","commitsCount":13,"pusher":{"login":"adamnovak","name":"Adam Novak","path":"/adamnovak","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5062495?s=80&v=4"},"commit":{"message":"Apply --max-dp-cells to BandedGlobalAligner and set to 100M for R10 and HiFi","shortMessageHtmlLink":"Apply --max-dp-cells to BandedGlobalAligner and set to 100M for R10 a…"}},{"before":"9867194ca05791b26561dcac5c8ae27a971ef940","after":"c78dce76ed83832f2e6d37e7b98d65992163e612","ref":"refs/heads/path-normalize","pushedAt":"2024-09-17T15:22:37.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"glennhickey","name":"Glenn Hickey","path":"/glennhickey","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/901102?s=80&v=4"},"commit":{"message":"set snarl distance to 0 in path normalize","shortMessageHtmlLink":"set snarl distance to 0 in path normalize"}},{"before":"d966fa746f5f4c58a2232134894d22bf8570f32c","after":"9867194ca05791b26561dcac5c8ae27a971ef940","ref":"refs/heads/path-normalize","pushedAt":"2024-09-17T15:16:10.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"glennhickey","name":"Glenn Hickey","path":"/glennhickey","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/901102?s=80&v=4"},"commit":{"message":"fix typo in path tests","shortMessageHtmlLink":"fix typo in path tests"}},{"before":"5ff434c5b1228859734d1459b2a6d6509ef51c08","after":"7bdac117184b8f798177b853a8e9aedc258c5076","ref":"refs/heads/gh-pages","pushedAt":"2024-09-17T15:00:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"adamnovak","name":"Adam Novak","path":"/adamnovak","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5062495?s=80&v=4"},"commit":{"message":"Commit new auto-generated docs","shortMessageHtmlLink":"Commit new auto-generated docs"}},{"before":"4db75c2104612e5b71391ea2d2c5ab883f27d641","after":"818ee2c4eb9a4b793a7e9763a50561d22ac6e00f","ref":"refs/heads/master","pushedAt":"2024-09-17T14:57:57.000Z","pushType":"pr_merge","commitsCount":6,"pusher":{"login":"glennhickey","name":"Glenn Hickey","path":"/glennhickey","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/901102?s=80&v=4"},"commit":{"message":"Merge pull request #4396 from vgteam/path-normalize\n\nAdd normalizer that snaps together redundant path traversals through sites","shortMessageHtmlLink":"Merge pull request #4396 from vgteam/path-normalize"}},{"before":"4e54c67117ded9e48ff6880e930354541547b762","after":"5ff434c5b1228859734d1459b2a6d6509ef51c08","ref":"refs/heads/gh-pages","pushedAt":"2024-09-13T21:08:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"adamnovak","name":"Adam Novak","path":"/adamnovak","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5062495?s=80&v=4"},"commit":{"message":"Commit new auto-generated docs","shortMessageHtmlLink":"Commit new auto-generated docs"}},{"before":"2220b91271f874d951c409142573acb3bbf7487e","after":"4db75c2104612e5b71391ea2d2c5ab883f27d641","ref":"refs/heads/master","pushedAt":"2024-09-13T21:04:28.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"jeizenga","name":"Jordan Eizenga","path":"/jeizenga","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7377501?s=80&v=4"},"commit":{"message":"Merge pull request #4397 from vgteam/rna-tandem-dup-exon\n\nHotfix for transcript projection onto haplotypes with tandem duplications in vg rna","shortMessageHtmlLink":"Merge pull request #4397 from vgteam/rna-tandem-dup-exon"}},{"before":null,"after":"042fb16fac0569251ddbd929c6d6a6557cf83711","ref":"refs/heads/rna-tandem-dup-exon","pushedAt":"2024-09-12T16:02:12.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"jeizenga","name":"Jordan Eizenga","path":"/jeizenga","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/7377501?s=80&v=4"},"commit":{"message":"remove threads that visit same exon multiple times","shortMessageHtmlLink":"remove threads that visit same exon multiple times"}},{"before":"f335c9ca544849c1a51b0edc98906cb6317b59c7","after":"22039a119a4d7dc21e47b29ae3365d6310397459","ref":"refs/heads/looping_distance_bug","pushedAt":"2024-09-12T09:52:30.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"xchang1","name":"Xian Chang","path":"/xchang1","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34357324?s=80&v=4"},"commit":{"message":"Update bdsg to fix distanceless distance indexing","shortMessageHtmlLink":"Update bdsg to fix distanceless distance indexing"}},{"before":"c5ff4208eb7b03e0f063d3a163c06aadd8a12ed8","after":"f335c9ca544849c1a51b0edc98906cb6317b59c7","ref":"refs/heads/looping_distance_bug","pushedAt":"2024-09-12T07:21:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xchang1","name":"Xian Chang","path":"/xchang1","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34357324?s=80&v=4"},"commit":{"message":"Fix unit test","shortMessageHtmlLink":"Fix unit test"}},{"before":"a1bf04d8201cc8b501a476d49599839a0f03fafa","after":"d966fa746f5f4c58a2232134894d22bf8570f32c","ref":"refs/heads/path-normalize","pushedAt":"2024-09-11T20:35:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"glennhickey","name":"Glenn Hickey","path":"/glennhickey","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/901102?s=80&v=4"},"commit":{"message":"Forgotten test file","shortMessageHtmlLink":"Forgotten test file"}},{"before":"c0be4ef5b485d2ece7de25bdd9ee76c19b6108c0","after":"a1bf04d8201cc8b501a476d49599839a0f03fafa","ref":"refs/heads/path-normalize","pushedAt":"2024-09-11T18:54:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"glennhickey","name":"Glenn Hickey","path":"/glennhickey","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/901102?s=80&v=4"},"commit":{"message":"add tests for paths normalizer","shortMessageHtmlLink":"add tests for paths normalizer"}},{"before":"62ac6a290c94957ea5156d4f3d569a328e4a0e1c","after":"c0be4ef5b485d2ece7de25bdd9ee76c19b6108c0","ref":"refs/heads/path-normalize","pushedAt":"2024-09-11T16:29:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"glennhickey","name":"Glenn Hickey","path":"/glennhickey","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/901102?s=80&v=4"},"commit":{"message":"threads option","shortMessageHtmlLink":"threads option"}},{"before":null,"after":"c5ff4208eb7b03e0f063d3a163c06aadd8a12ed8","ref":"refs/heads/looping_distance_bug","pushedAt":"2024-09-11T16:09:12.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"xchang1","name":"Xian Chang","path":"/xchang1","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34357324?s=80&v=4"},"commit":{"message":"Fix orientation of topological sort","shortMessageHtmlLink":"Fix orientation of topological sort"}},{"before":"b57adcf1bcd47e5cb59aa3be8f43f1fd2547f4fb","after":"62ac6a290c94957ea5156d4f3d569a328e4a0e1c","ref":"refs/heads/path-normalize","pushedAt":"2024-09-11T14:42:26.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"glennhickey","name":"Glenn Hickey","path":"/glennhickey","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/901102?s=80&v=4"},"commit":{"message":"fix strand bug","shortMessageHtmlLink":"fix strand bug"}},{"before":"3bfb4b9e9abab71358aa53a7fdc84ed391a52e6a","after":"b57adcf1bcd47e5cb59aa3be8f43f1fd2547f4fb","ref":"refs/heads/path-normalize","pushedAt":"2024-09-11T12:53:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"glennhickey","name":"Glenn Hickey","path":"/glennhickey","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/901102?s=80&v=4"},"commit":{"message":"add normalizer to vg paths","shortMessageHtmlLink":"add normalizer to vg paths"}},{"before":"3106253e39c63dfa146169fa8c4cf33d20f5dc3f","after":"4e54c67117ded9e48ff6880e930354541547b762","ref":"refs/heads/gh-pages","pushedAt":"2024-09-11T12:53:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"adamnovak","name":"Adam Novak","path":"/adamnovak","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5062495?s=80&v=4"},"commit":{"message":"Commit new auto-generated docs","shortMessageHtmlLink":"Commit new auto-generated docs"}},{"before":"95bcbb42f027ac82188bed31de2af0159d2c3204","after":"2220b91271f874d951c409142573acb3bbf7487e","ref":"refs/heads/master","pushedAt":"2024-09-11T12:47:16.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"glennhickey","name":"Glenn Hickey","path":"/glennhickey","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/901102?s=80&v=4"},"commit":{"message":"Merge pull request #4394 from vgteam/path-normalize\n\nFix build on Ubuntu 24.04.1 / GCC 13.2.0","shortMessageHtmlLink":"Merge pull request #4394 from vgteam/path-normalize"}},{"before":"fa824c1f5500a71ee215311e18049c46c50712b5","after":"3bfb4b9e9abab71358aa53a7fdc84ed391a52e6a","ref":"refs/heads/path-normalize","pushedAt":"2024-09-10T18:39:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"glennhickey","name":"Glenn Hickey","path":"/glennhickey","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/901102?s=80&v=4"},"commit":{"message":"switch back to upstream for sublinear li-stephens","shortMessageHtmlLink":"switch back to upstream for sublinear li-stephens"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0yM1QxOTowNjozNy4wMDAwMDBazwAAAAS-WGJh","startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0yM1QxOTowNjozNy4wMDAwMDBazwAAAAS-WGJh","endCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0xMFQxODozOTozNi4wMDAwMDBazwAAAASyaJZW"}},"title":"Activity · vgteam/vg"}