Integration of pathway-related information from MSigDB in BEL
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Updated
Nov 18, 2020 - Python
Integration of pathway-related information from MSigDB in BEL
GMT files for the mulea R package
Assessing dIfferential expression, dispersion, distribution analyses on TCGA tumour-normal RNA-seq datasets
AskoR pipeline: analysis of gene expression data, using edgeR.
GOpiscator is a command-line tool for performing gene set enrichment analysis using the Gene Ontology (GO) database.
condense GSEA terms
A library for differential expression and gene set enrichment analysis based on hydra and pydantic.
Transcriptiome Analysis in Python Imported from R
Bayesian tests for set enrichment 🍞
Package to gather gene information, annotations, and functions
mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate
DBRetina python package
A Snakemake workflow for performing genomic region set and gene set enrichment analyses using LOLA, GREAT, GSEApy, pycisTarget and RcisTarget.
Flexible gene set enrichment analysis
Experimental version of data package associated with chipenrich
Julia implementation of the next generation GSEA 🏔️
Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)
piano - An R/Bioconductor package for gene set analysis
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