Detecting contamination in NGS data and multi-species analysis
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Updated
Sep 20, 2024 - HTML
Detecting contamination in NGS data and multi-species analysis
A computational toolkit of fast and automatical identification of back-splice junctions of potential circular RNAs (circRNAs) from RNA-seq data.
Analyzing shotgun data
The project for the course "Web Information Retrieval"
Code designed to run on Atom Computer's Tinker Tie. http://atomcomputer.us/tinkertie/
🌠 Easily download genomes and build BLAST/Bowtie indexes in Python
🔬 A replication of ChiP-Seq analysis from an experiment regarding gene induction and repression during terminal erythropoiesis that are mediated by distinct epigenetic changes
A theme for Bowtie with a big 600px cover and CSS flip animation.
Bowtie-based alignment of CRISPR gRNA spacer sequences
Different approaches to calculate mappability and GC-rich tracks for danio rerio genomes
Expanded version of the traditional Smith Waterman algorithm for local alignment
Tutorials for the crisprVerse
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