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SWMPrats_pres.html
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<!DOCTYPE html>
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<head>
<title>Open Science tools for the National Estuarine Research Reserve System</title>
<meta charset="utf-8" />
<meta name="author" content="Dr. Marcus Beck \bullet @fawda123 \bullet #TampaBayOpensci" />
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class: center, middle, inverse, title-slide
# Open Science tools for the National Estuarine Research Reserve System
### <a href="mailto:marcusb@sccwrp.org">Dr. Marcus Beck</a> <span class="math inline">•</span> <a href="https://twitter.com/fawda123">@fawda123</a> <span class="math inline">•</span> <a href="https://twitter.com/hashtag/TampaBayOpenSci?src=hashtag_click">#TampaBayOpensci</a>
### Southern California Coastal Water Research Project
### 9/5/2019
---
class: center, middle
# The NERRS network
<img src="figure/NERRS_locations.png" width="100%" />
---
# The need for open science at NERRS
#### NERRS researchers, managers, technicians, and stakeholders need more quantitative tools for handling these data:
* Understand regional and national trends while retaining the ability to determine local trends
* Train users
* Maintain a versatile and evolving data analysis approach
* Create a community of practice
---
# Genesis of SWMPrats
<img src="figure/bg_main.jpg" width="1276" />
#### One-day training workshop at 2014 annual meeting
* Attended by over 70 NERRS staff, representing 19 of 28 reserves
* General focus on time series analysis, simple application with SWMP data
* Pre/post workshop materials including An R package for SWMP
---
# Genesis of SWMPrats
<img src="figure/swmprats_logo.png" width="1273" />
#### A working group was formed from this meeting
## __S__ystem- __W__ide __M__onitoring __P__rogram __R__esources for the __A__nalysis of __T__ime __S__eries
#### [SWMPrats.net](SWMPrats.net) is our base of operations...
---
class: center, top
# SWMPrats.net
A website with information and tools for SWMP data analysis
<img src="figure/swmprats_home.png" width="80%" />
---
# SWMPrats.net: The SWMPr package
<img src="figure/swmpr_logo.png" width="1827" />
SWMPr is an open-source R package for working with SWMP data
* Dealing with "bad" data
* Subsetting by date ranges, parameters
* Combining data from different sites
* Standardizing time steps
* ...not to mention the analysis
---
# SWMPrats.net: Interactive web apps
.pull-left[
The most common question - what's happened at my site over time?
Three Shiny applications allow users to visualize trends in SWMP data, these apps allow *reactive* use of SWMPr functions
<br></br>
<img src="figure/swmp_summary.png" width="70%" />
]
.pull-right[
<img src="figure/swmp_comp.png" width="80%" />
<br></br>
<img src="figure/swmp_agg.png" width="80%" />
]
---
# Why should you care?
* These tools will be used! To date, SWMPr has had over __13k__ downloads!
--
* Increased mileage of data - more users looking at more questions = more answers!
--
* Develop a community of practice - shared workflows promote collaboration and encourage group learning!
--
* More group learning means collective benefits for all - more efficient use of resources!
</textarea>
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