From 1db340f3d6bfaccb2f30d4cbfbef5e6a03883d60 Mon Sep 17 00:00:00 2001 From: Connor Skennerton Date: Mon, 2 Sep 2019 18:49:58 -0700 Subject: [PATCH] update the version string --- .gitignore | 1 + minced.java | 2 +- t/Aquifex_aeolicus_VF5.expected | 12 ++++++------ 3 files changed, 8 insertions(+), 7 deletions(-) diff --git a/.gitignore b/.gitignore index 8e9e794..b32eb25 100644 --- a/.gitignore +++ b/.gitignore @@ -1,2 +1,3 @@ *.class *.jar +t/*output diff --git a/minced.java b/minced.java index cb0def5..a9d98ec 100644 --- a/minced.java +++ b/minced.java @@ -2,7 +2,7 @@ public class minced { - public static final String VERSION = "0.4.0"; + public static final String VERSION = "0.4.2"; public static void main(String[] args) { //default values diff --git a/t/Aquifex_aeolicus_VF5.expected b/t/Aquifex_aeolicus_VF5.expected index 559a890..dbc054c 100644 --- a/t/Aquifex_aeolicus_VF5.expected +++ b/t/Aquifex_aeolicus_VF5.expected @@ -1,7 +1,7 @@ ##gff-version 3 -gi|15282445|ref|NC_000918.1| minced:0.4.0 repeat_region 156460 156767 5 . . ID=CRISPR1;rpt_type=direct;rpt_family=CRISPR;rpt_unit_seq=GTTCCTAATGTACCGTGTGGAGTTGAAACC -gi|15282445|ref|NC_000918.1| minced:0.4.0 repeat_region 244561 244791 4 . . ID=CRISPR2;rpt_type=direct;rpt_family=CRISPR;rpt_unit_seq=GTTTCAACTCCACACGGTACATTAGGAAC -gi|15282445|ref|NC_000918.1| minced:0.4.0 repeat_region 279264 279555 5 . . ID=CRISPR3;rpt_type=direct;rpt_family=CRISPR;rpt_unit_seq=GTTTTAACTCCACACGGTACATTAGAAAC -gi|15282445|ref|NC_000918.1| minced:0.4.0 repeat_region 1226626 1226861 4 . . ID=CRISPR4;rpt_type=direct;rpt_family=CRISPR;rpt_unit_seq=CGTTTCTAATGTACCGTAGAGGAGTTGAAAC -gi|15282445|ref|NC_000918.1| minced:0.4.0 repeat_region 1379598 1379894 5 . . ID=CRISPR5;rpt_type=direct;rpt_family=CRISPR;rpt_unit_seq=GTTTCAACTCCACTACGGTACATTAGGAAC -gi|15282445|ref|NC_000918.1| minced:0.4.0 repeat_region 1418900 1419060 3 . . ID=CRISPR6;rpt_type=direct;rpt_family=CRISPR;rpt_unit_seq=GTTCCTAATGTACCGTGTGGAGTTGAAAC +gi|15282445|ref|NC_000918.1| minced:0.4.2 repeat_region 156460 156767 5 . . ID=CRISPR1;rpt_type=direct;rpt_family=CRISPR;rpt_unit_seq=GTTCCTAATGTACCGTGTGGAGTTGAAACC +gi|15282445|ref|NC_000918.1| minced:0.4.2 repeat_region 244561 244791 4 . . ID=CRISPR2;rpt_type=direct;rpt_family=CRISPR;rpt_unit_seq=GTTTCAACTCCACACGGTACATTAGGAAC +gi|15282445|ref|NC_000918.1| minced:0.4.2 repeat_region 279264 279555 5 . . ID=CRISPR3;rpt_type=direct;rpt_family=CRISPR;rpt_unit_seq=GTTTTAACTCCACACGGTACATTAGAAAC +gi|15282445|ref|NC_000918.1| minced:0.4.2 repeat_region 1226626 1226861 4 . . ID=CRISPR4;rpt_type=direct;rpt_family=CRISPR;rpt_unit_seq=CGTTTCTAATGTACCGTAGAGGAGTTGAAAC +gi|15282445|ref|NC_000918.1| minced:0.4.2 repeat_region 1379598 1379894 5 . . ID=CRISPR5;rpt_type=direct;rpt_family=CRISPR;rpt_unit_seq=GTTTCAACTCCACTACGGTACATTAGGAAC +gi|15282445|ref|NC_000918.1| minced:0.4.2 repeat_region 1418900 1419060 3 . . ID=CRISPR6;rpt_type=direct;rpt_family=CRISPR;rpt_unit_seq=GTTCCTAATGTACCGTGTGGAGTTGAAAC