{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":198902212,"defaultBranch":"master","name":"CNAqc","ownerLogin":"caravagnalab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2019-07-25T21:17:07.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/73030283?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1707230127.0","currentOid":""},"activityList":{"items":[{"before":"dce5874dfca01f6099b9f0e19b5ebe1bfe14861f","after":"31566bd75de74fd81ae6e8f7287553e3135e874c","ref":"refs/heads/development","pushedAt":"2024-08-08T08:38:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"including custom reference genome","shortMessageHtmlLink":"including custom reference genome"}},{"before":"c3d17afe895e069a69a67afb0a90c8761d4ccd98","after":"dce5874dfca01f6099b9f0e19b5ebe1bfe14861f","ref":"refs/heads/development","pushedAt":"2024-08-08T08:37:48.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"updating mcnaqc documentation","shortMessageHtmlLink":"updating mcnaqc documentation"}},{"before":"61d2c785b5a058d4928c050e0de85d3385e05562","after":"af60bd452ef25cc692eb21d71764b837bf9ba416","ref":"refs/heads/gh-pages","pushedAt":"2024-07-18T09:08:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Built site for CNAqc@1.0.0: f7b2ecd","shortMessageHtmlLink":"Built site for CNAqc@1.0.0: f7b2ecd"}},{"before":"00cd966075c693cdce8c4f9f33503a826a060fe5","after":"f7b2ecd5cdaca81adba1b21159ef217d847191e7","ref":"refs/heads/master","pushedAt":"2024-07-18T08:56:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"AliceAntonello","name":null,"path":"/AliceAntonello","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/89510091?s=80&v=4"},"commit":{"message":"fix simple_peak_detector bug","shortMessageHtmlLink":"fix simple_peak_detector bug"}},{"before":"cb0300b173d6815db3cd66983aebcb8dde326cb7","after":"61d2c785b5a058d4928c050e0de85d3385e05562","ref":"refs/heads/gh-pages","pushedAt":"2024-07-12T16:29:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Built site for CNAqc@1.0.0: 00cd966","shortMessageHtmlLink":"Built site for CNAqc@1.0.0: 00cd966"}},{"before":"274cde98eada0416cfd1450fded957838b10199a","after":"00cd966075c693cdce8c4f9f33503a826a060fe5","ref":"refs/heads/master","pushedAt":"2024-07-12T16:10:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"AliceAntonello","name":null,"path":"/AliceAntonello","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/89510091?s=80&v=4"},"commit":{"message":"fix bug map_mutations_to_subclonal_segments","shortMessageHtmlLink":"fix bug map_mutations_to_subclonal_segments"}},{"before":"c36c4ddd889fd3f040adc6cb3778e2ac559c034d","after":"c3d17afe895e069a69a67afb0a90c8761d4ccd98","ref":"refs/heads/development","pushedAt":"2024-07-12T10:56:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"fixing documentation","shortMessageHtmlLink":"fixing documentation"}},{"before":"7ff5d25a38622b579fb2b01d050036ec12145cc6","after":"c36c4ddd889fd3f040adc6cb3778e2ac559c034d","ref":"refs/heads/development","pushedAt":"2024-06-28T16:14:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"mcnaqc plot","shortMessageHtmlLink":"mcnaqc plot"}},{"before":"66f158fbad55c053332f07715949b15477061312","after":"7ff5d25a38622b579fb2b01d050036ec12145cc6","ref":"refs/heads/development","pushedAt":"2024-06-10T14:44:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"new flag in multisample_init and improved analyze_peaks","shortMessageHtmlLink":"new flag in multisample_init and improved analyze_peaks"}},{"before":"12d4c86601dbfb28633826d8dba3ed091f7b540a","after":"66f158fbad55c053332f07715949b15477061312","ref":"refs/heads/development","pushedAt":"2024-05-31T09:37:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"added min_vaf argument for peak analysis","shortMessageHtmlLink":"added min_vaf argument for peak analysis"}},{"before":"78feb29d2439320650fcf7d2fecaa0ac6af0f5ce","after":"12d4c86601dbfb28633826d8dba3ed091f7b540a","ref":"refs/heads/development","pushedAt":"2024-05-23T11:01:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"fixed sample getter mcnaqc","shortMessageHtmlLink":"fixed sample getter mcnaqc"}},{"before":"cdbf008fab227fde8568c82b59da0fabe62aca14","after":"78feb29d2439320650fcf7d2fecaa0ac6af0f5ce","ref":"refs/heads/development","pushedAt":"2024-05-21T16:00:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"fix","shortMessageHtmlLink":"fix"}},{"before":"d1928c98829b3b2c7b9bc7e08b412dbbd12962eb","after":"cdbf008fab227fde8568c82b59da0fabe62aca14","ref":"refs/heads/development","pushedAt":"2024-05-02T08:35:16.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"Merge branch 'development' of https://github.com/caravagnalab/CNAqc into development","shortMessageHtmlLink":"Merge branch 'development' of https://github.com/caravagnalab/CNAqc i…"}},{"before":"d73ffa36bc2112489697d95ca4903c454ced903d","after":"d1928c98829b3b2c7b9bc7e08b412dbbd12962eb","ref":"refs/heads/development","pushedAt":"2024-04-03T13:00:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"fixed rd multisample","shortMessageHtmlLink":"fixed rd multisample"}},{"before":"65e9d79e60a9943e0b223e18d7032ef54f823bf5","after":"d73ffa36bc2112489697d95ca4903c454ced903d","ref":"refs/heads/development","pushedAt":"2024-03-28T10:06:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"minor things on documentation of mcnaqc","shortMessageHtmlLink":"minor things on documentation of mcnaqc"}},{"before":"1b0b4d4d0b94d17013b33f42b648819c73ec32fb","after":"65e9d79e60a9943e0b223e18d7032ef54f823bf5","ref":"refs/heads/development","pushedAt":"2024-03-27T10:00:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"print method for mcnaqc","shortMessageHtmlLink":"print method for mcnaqc"}},{"before":"19dc7d393ddd646081d10df42a423becd8caf22f","after":"1b0b4d4d0b94d17013b33f42b648819c73ec32fb","ref":"refs/heads/development","pushedAt":"2024-03-21T11:33:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"fixed names","shortMessageHtmlLink":"fixed names"}},{"before":"3dc4f0ec5fdeacecf9301be7f714a5801c28a17a","after":"19dc7d393ddd646081d10df42a423becd8caf22f","ref":"refs/heads/development","pushedAt":"2024-03-20T11:01:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"fixed vignette multiCNAqc","shortMessageHtmlLink":"fixed vignette multiCNAqc"}},{"before":"5493817cbdbc040331e696613ba7c97191355e08","after":"3dc4f0ec5fdeacecf9301be7f714a5801c28a17a","ref":"refs/heads/development","pushedAt":"2024-03-20T09:43:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"added man","shortMessageHtmlLink":"added man"}},{"before":"58b64976e169f68306452dc648938ec7bd0e2cb0","after":"5493817cbdbc040331e696613ba7c97191355e08","ref":"refs/heads/development","pushedAt":"2024-03-12T08:49:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"fixing roxygen typos","shortMessageHtmlLink":"fixing roxygen typos"}},{"before":"ff51cd8e4aaa7e83d8f726cc43a6da899bcd0bc1","after":"58b64976e169f68306452dc648938ec7bd0e2cb0","ref":"refs/heads/development","pushedAt":"2024-03-11T13:50:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"fixed vep vignette","shortMessageHtmlLink":"fixed vep vignette"}},{"before":"81e0d20618169f204b0f8782ffb6813e5159fadf","after":"ff51cd8e4aaa7e83d8f726cc43a6da899bcd0bc1","ref":"refs/heads/development","pushedAt":"2024-03-11T11:42:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"added getters for mcnaqc and vignette","shortMessageHtmlLink":"added getters for mcnaqc and vignette"}},{"before":"7472c0a766d7d5598fcc5dde5e056c82d2a478f8","after":"81e0d20618169f204b0f8782ffb6813e5159fadf","ref":"refs/heads/development","pushedAt":"2024-03-08T13:25:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"added VAF filter","shortMessageHtmlLink":"added VAF filter"}},{"before":"050c18de0374da12839d4c32f7d887867a5c860a","after":"7472c0a766d7d5598fcc5dde5e056c82d2a478f8","ref":"refs/heads/development","pushedAt":"2024-02-22T13:31:27.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"fixed the qc filter","shortMessageHtmlLink":"fixed the qc filter"}},{"before":"f4044349d8efce20fb66df02c159bb60d3e55461","after":"050c18de0374da12839d4c32f7d887867a5c860a","ref":"refs/heads/development","pushedAt":"2024-02-16T15:36:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"added QC_filter and keeping of results of original CNAqc analysis","shortMessageHtmlLink":"added QC_filter and keeping of results of original CNAqc analysis"}},{"before":"72c847e80cfefd2fe2a421a28e90342efd24277a","after":"f4044349d8efce20fb66df02c159bb60d3e55461","ref":"refs/heads/development","pushedAt":"2024-02-16T11:55:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"keeping private mutations","shortMessageHtmlLink":"keeping private mutations"}},{"before":"d5f4e6ed0ff4c419355e754a3dd01799631908c9","after":"72c847e80cfefd2fe2a421a28e90342efd24277a","ref":"refs/heads/development","pushedAt":"2024-02-14T14:23:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"changed rbind with bind_rows","shortMessageHtmlLink":"changed rbind with bind_rows"}},{"before":"e70251ac310947c2bfed3b63c8e11e34a0fd0278","after":"d5f4e6ed0ff4c419355e754a3dd01799631908c9","ref":"refs/heads/development","pushedAt":"2024-02-13T21:50:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"updated removing uncommon segments","shortMessageHtmlLink":"updated removing uncommon segments"}},{"before":"e8c7a0f286f5b11c905f505f11d464278cd3f052","after":"e70251ac310947c2bfed3b63c8e11e34a0fd0278","ref":"refs/heads/development","pushedAt":"2024-02-13T10:10:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"fixed minor thing","shortMessageHtmlLink":"fixed minor thing"}},{"before":"c61943e5ba13fe0c19dc78c7d1bd1472f85734a5","after":"e8c7a0f286f5b11c905f505f11d464278cd3f052","ref":"refs/heads/development","pushedAt":"2024-02-13T09:30:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"vvvirgy","name":"Virginia Gazziero","path":"/vvvirgy","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/148044855?s=80&v=4"},"commit":{"message":"multisample breakpoints last version\n\nAdded corrected and commented script for multisample breakpoints","shortMessageHtmlLink":"multisample breakpoints last version"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOC0wOFQwODozODowOS4wMDAwMDBazwAAAASVAsZJ","startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOC0wOFQwODozODowOS4wMDAwMDBazwAAAASVAsZJ","endCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wMi0xM1QwOTozMDowNS4wMDAwMDBazwAAAAP5S3eW"}},"title":"Activity · caravagnalab/CNAqc"}