Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Requirement.txt for helixdock and examples #289

Open
lifecodetest opened this issue May 24, 2024 · 4 comments
Open

Requirement.txt for helixdock and examples #289

lifecodetest opened this issue May 24, 2024 · 4 comments

Comments

@lifecodetest
Copy link

Would you please add the relevant requirement.txt file as given in the installation instructions for helixdock? Would you also please provide some example codes and tutorials (e.g. in jupyter notebook format) on how to generate results with helixdock for problems other than reproducing the results from your paper?

@Noisyntrain
Copy link
Collaborator

Hi lifecodetest, the requirements.txt is now uploaded. The tutorials is currently being developed and tested and will be uploaded soon. You can also generate results in our webstie : https://paddlehelix.baidu.com/app/drug/helix-dock/forecast .Hope this can be helpful to you.

@lifecodetest
Copy link
Author

Thanks. Look forward to the tutorials for helixdock.

@lifecodetest
Copy link
Author

HI actually I encountered error when trying to pip install logging, but it seems like there is no such need if one has installed python (https://stackoverflow.com/questions/33175525/unable-to-install-logging-module-python) so you may want to remove logging from the requirements.txt file.

@Noisyntrain
Copy link
Collaborator

Thank you for the reminding, logging is now removed from the requirements.txt :)

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants