david_granjon_cv.Rmd

---
title: "David Granjon"
author: David Granjon
date: "`r Sys.Date()`"
output:
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---

Aside
================================================================================

<img style="border-radius: 50%" src="https://avatars.githubusercontent.com/divadnojnarg" alt="profile_image" width="75%">

Contact Info {#contact}
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- <i class="fa fa-github"></i> [DivadNojnarg](github.com/DivadNojnarg)
- <i class="fa fa-home"></i> [RinteRface](https://rinterface.com)
- <i class="fa fa-twitter"></i> [divadnojnarg](https://twitter.com/divadnojnarg)

References {#references}
--------------------------------------------------------------------------------

[Dr. Douglas Robinson](mailto:robinson_dm@hotmail.com) </br>
[Dr. Aurélie Edwards](mailto:aued@bu.edu) </br>
[Pr. Olivier Bonny](mailto:olivier.bonny@unil.ch) </br>
[Dr. Laurent Pujo-Menjouet](mailto:pujo@math.univ-lyon1.fr) </br>
[Dr. Diane de Zélicourt](mailto:diane.dezelicourt@physiol.uzh.ch) </br>
[Pr. Vartan Kurtcuoglu](mailto:vartan.kurtcuoglu@uzh.ch)

Skills {#skills}
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- <strong>Data Analysis:</strong> R 
- <strong>Web development:</strong> {Shiny}, JavaScript, React, HTML, CSS, Framework7, Bootstrap, webpack
- <strong>Reporting:</strong> {rmarkdown}, {pagedown}, {bookdown}, Latex, quarto
- <strong>R-Workflow:</strong> Git, CI/CD (github-actions, ...), {renv}, {golem}, {devtools}, {profvis}, {usethis}, {testthat}, ...


Languages {#speak}
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- French (native)
- English (C1)


Main
================================================================================

David Granjon {#title}
--------------------------------------------------------------------------------

### Currently: Senior Data Science Expert, Novartis AG
  - Founder of [RinteRface](https://rinterface.com)
  - R Shiny advocate



Education {data-icon=graduation-cap data-concise=true}
--------------------------------------------------------------------------------

### PhD in Life Sciences

Thesis title: ”Modeling of Calcium Homeostasis in the Rat and its Perturbations”.
Building of a mathematical model describing calcium homeostasis, including its analysis and simulation of pathologies. Advisors: Dr. Aurélie Edwards and Pr. Olivier Bonny.

Université Pierre et Marie Curie, Paris, Université de Lausanne, Switzerland

2013-2016

### Master's Degree in Ecosiences, MIV

Main subjects: Mathematics, Theoretical Ecology and Programming.

Université Claude Bernard (UCBL), Lyon

2011-2013

### Licence (3 year degree) in Mathematics and Computer Sciences for the Living (MIV)

Main subjects: Mathematics, Ecology and Computer Sciences.

Université Claude Bernard (UCBL), Lyon

2010-2011


### Preparatory School for Engineers

Main subjects: Mathematics, Physics, Biology, Geology.

Lycée Claude Fauriel, Saint Etienne

2008-2010



Professional Experience {data-icon=suitcase}
--------------------------------------------------------------------------------

### Principal Scientist and Consultant
Software development

Novartis AG (Basel)

06/19 - 06/21

Projects overview:

  - Support Novartis associates to develop production ready Shiny apps for clinical activities.
  - Deliver high quality workshops to promote best practices around Shiny apps.
  - Maintain internal tools: R packages, databases, web servers, ...
  - Represent Novartis at international R conferences (R in Pharma).

### Post Doctoral Researcher

Software engineer

The Interface Group, University of Zurich (UZH)

06/17 - 06/19

Two main projects:

  - Design user-friendly interfaces of Calcium and Phosphate Homeosta-
sis, using the R-Shiny package, javascript and C. Management of linux web servers. Design new interactive tools dedicated to teaching courses.
  - Develop a model linking the cardiac and renal functions, to better understand the interplay between chronic kidney disease as well as cardiac failure. Create virtual patient populations using Monte Carlo simulations.
  

::: aside

<div class="card">
<div class="container">
<img src="https://github.com/RinteRface/shinyMobile/raw/master/man/figures/logo.png" alt="Avatar" style="width:100%">
<p>Develop outstanding {shiny} apps for iOS, Android and desktop.</p> 
[![code](https://img.shields.io/badge/code-available-1f8eed.svg)](https://github.com/RinteRface/shinyMobile)
[![CRAN status](https://www.r-pkg.org/badges/version/shinyMobile)](https://cran.r-project.org/package=shinyMobile)
</div>
</div>

</br>

<div class="card">
<div class="container">
<img src="https://rinterface.com/inst/images/bs4Dash.svg" alt="Avatar" style="width:100%">
<p>Bootstrap 4 shinydashboard using AdminLTE3.</p> 
[![code](https://img.shields.io/badge/code-available-1f8eed.svg)](https://github.com/RinteRface/bs4Dash)
[![CRAN status](https://www.r-pkg.org/badges/version/bs4Dash)](https://cran.r-project.org/package=bs4Dash)
</div>
</div>

</br>

:::


### Post Doctoral Researcher
Improvements to the model developed during my doctoral thesis. Publication of a second article (see publications). Supervisors: Dr. Aurélie Edwards and Pr. Olivier Bonny.

CHUV, Lausanne university hospital, Switzerland.

01/17 - 03/17

### Internship in a Team of Theoretical Physiology

Improvements to the model developed during the previous internship. Supervisors: Dr. Moisés Santillan, Pr. Michael Mackey.

Centre for Applied Mathematics in Bioscience and Medicine (CAMBAM), Mc Gill University, Montreal, Canada.

07/13 - 08/13

### Internship in a Laboratory of Applied Mathematics
Project title: "Multiscale modeling of Zebrafish Somitogenesis".
Development of a model accounting for the intra-cellular oscillator in each cell during somitogenesis. Supervisors: Dr. Laurent Pujo-menjouet (UCBL), Pr. Michael Mackey (Mc Gill, Canada).

Institut National de Recherche en Informatique et Automatique (INRIA), Team Dracula, Lyon.

01/13 - 07/13

### Internship in a Laboratory of Applied Mathematics
Project title: "Mathematical modeling of somitogenesis, reaction- diffusion systems".
Analysis of two mathematical models: cell-cycle and clock/wavefront models. Supervisor: Dr. Laurent Pujo-Menjouet (UCBL).

Institut National de Recherche en Informatique et Automatique (INRIA), Team Dracula, Lyon.

03/12 - 07/12


### Internship in a Laboratory of Theoretical Ecology
Project title: "Ecotoxicology of Daphnia Magna".
Study of the impact of pollution on the growth of Daphnia Magna through mathematical models. Supervisors: Pr. Sandrine Charles (UCBL), Pr. Marie Laure Delignette Muller (Ecole Nationale Vétérinaire de Lyon).

Laboratoire de Biométrie et Biologie Evolutive (LBBE), Team Modélisation et Ecotoxycologie Prédictive (MEPS), Lyon.

06/11 - 08/11


Publications {data-icon=newspaper}
--------------------------------------------------------------------------------

### Coupling between Phosphate and Calcium Homeostasis: A Mathematical Model
American Journal of Physiology-Renal Physiology, 313(6): F1181-F1199. doi: 10.1152/ajprenal.00271.2017

N/A

2017

D. Granjon, O. Bonny, A. Edwards.

### A Model of Calcium Homeostasis in the Rat
American Journal of Physiology-Renal Physiology, 311 (5): F1047-F1062. doi: 10.1152/ajprenal.00230.2016

N/A

2016

D. Granjon, O. Bonny, A. Edwards.


Books {data-icon=book}
--------------------------------------------------------------------------------

### Outstanding User Interfaces with Shiny
This book provides the necessary knowledge to extend Shiny's layout: 
https://unleash-shiny.rinterface.com.

CRC Press, R [series](https://www.routledge.com/Outstanding-User-Interfaces-with-Shiny/Granjon/p/book/9780367643652) 

2022

D. Granjon

:::aside

<div class="card">
<div class="container">
<img src="https://user-images.githubusercontent.com/18291543/181491295-1a5b498c-e7ee-428c-a1af-c3ee22e35ef5.jpg" alt="Avatar" style="width:100%">
<p>Outstanding Shiny.</p> 
[![code](https://img.shields.io/badge/code-available-1f8eed.svg)](https://github.com/DivadNojnarg/outstanding-shiny-ui)
[![Buy](https://img.shields.io/badge/buy-here-1f8eed.svg)](https://www.routledge.com/Outstanding-User-Interfaces-with-Shiny/Granjon/p/book/9780367645267)
</div>
</div>

</br>

<div class="card">
<div class="container">
<img src="https://rinterface.com/inst/images/shinydashboardPlus.svg" alt="Avatar" style="width:100%">
<p>Extensions for shinydashboard.</p> 
[![code](https://img.shields.io/badge/code-available-1f8eed.svg)](https://github.com/RinteRface/shinydashboardPlus)
[![CRAN status](https://www.r-pkg.org/badges/version/shinydashboardPlus)](https://cran.r-project.org/package=shinydashboardPlus)
</div>
</div>

:::

Conferences and Talks {data-icon=user-friends}
--------------------------------------------------------------------------------

### R in Pharma 2022

Workshop: Introduction to {shinyValidator}: https://rinpharma2022.rinterface.com/

Online

02/11/2022

### Shiny Conf 2022 by Appsilon

Invited talk: {shinyValidator}: toward a new audit process for Shiny apps quality through CI/CD: https://appsilonconf2022.rinterface.com

Online

29/04/2022

### R in Pharma 2021
Talk: Outstanding User Interfaces with Shiny: https://github.com/RinteRface/rinpharma2021

Online

04/11/2021

### R in Pharma 2021
Workshop: Unleash Shiny 2021: https://rinpharma2021.rinterface.com

Online

10/10/2021

### Beyond DataViz: How to Improve the UI/UX of Your Shiny Apps (Podcast)
Interview: `{deminR}` a R powered minesweeper: https://www.crowdcast.io/e/shiny-apps-UX-UI-design?__s=81h3pqtq7v4b70zpyfa1

Online

29/09/2021

### Rencontres R 2021
Workshop: `{shinyMobile}` Hands-on: https://github.com/RinteRface/rencontresR2021

Remote (Covid 2019)

07/09/2021

### Shiny Developers Series 2021
Podcast interview: "Outstanding User Interfaces with David Granjon: https://shinydevseries.com/post/episode-20-shinyui/.

Online

05/2021

### R in Pharma 2020
Workshop: Unleash Shiny: https://github.com/RinteRface/Unleash-Shiny

Remote (Covid 2019)

09/10/2020

### eRum 2020
Workshop: Advanced User Interfaces for Shiny Developers: https://github.com/Novartis/Advanced-User-Interfaces-for-Shiny-Developers, https://rinterface.com/shiny/talks/eRum2020/dg/#slide=1

Remote (Covid 2019)

May 2020

### satRdayNeuch 2020
Oral presentation: An introduction to shinyMobile: https://github.com/DivadNojnarg/satRdayNeuch2020.

Remote (Covid 2019)

14/03/2020

::: aside

<div class="card">
<div class="container">
<img src="https://rinterface.com/inst/images/charpente.png" alt="Avatar" style="width:100%">
<p>Tools to develop Shiny extensions.</p> 
[![code](https://img.shields.io/badge/code-available-1f8eed.svg)](https://github.com/RinteRface/charpente)
[![doc](https://img.shields.io/badge/doc-here-brightgreen.svg)](https://unleash-shiny.rinterface.com/workflow-charpente.html)
</div>
</div>

:::

### Zurich R User Group
Oral presentation: "shinyMobile: Build Native Looking Shiny Apps: https://rinterface.com/shiny/talks/zurichR2020/index.html#slide=1.

Zurich

29/01/2020


### BaselR
Oral presentation: "Development of a web application to represent models of calcium and phosphate homeostasis using R.

Basel

05/12/2019


### Shiny Developers Series 2019
Podcast interview: "Production-ready UIs for Shiny: https://shinydevseries.com/post/episode-4-rinterface/.

Online

08/2019


### useR 2019
Poster presentation: "A Shiny Powered Virtual Patient: https://github.com/DivadNojnarg/userR2019.

Toulouse

09/07/19 - 12/07/19


### Zurich R User Group
Oral presentation: "RinteRface, Production-ready UIs for Shiny: https://rinterface.com/shiny/talks/zurichR2019/index.html#slide=1.

Zurich

27/05/19


### NCCR Kidney.CH Retreat 2019
Oral presentation: ”Web applications for physiology: bridge the gap between research and teaching”.

Murten, Switzerland

31/01/19 - 01/02/19

### NCCR Kidney.CH Summer School 2018
Poster first author: ”Web-based e-learning tools of Calcium and Phosphate Homeostasis”.

Zurich, Switzerland

09/09/18 - 12/09/18

### World Congress of Biomechanics 2018
Poster first author: ”Addressing biomedical diversity via eLearning, an example from a physiology curriculum”.

Dublin, Ireland

08/07/18 - 12/07/18


### NCCR Kidney.CH Retreat 2018 
Poster first author: ”A web-based application of Calcium and Phosphate Homeostasis”.

Murten, Switzerland

01/02/18 - 02/02/18


### Bachelor–Themenworkshops 5. Semester HS 2017
Oral presentation: Computational Physiology.

Zurich University of the Arts, Switzerland

17/10/17

### Meeting of the Federation of Physiological Societies and the French Physiological Society 

Poster presentation: ”Role of the rapidly exchangeable calcium pool in bone in calcium homeostasis”.

Centre de Recherche des Cordeliers, Paris

29/06/16 - 1/07/16


### Annual Franco-Swiss Meeting on Electrolytes Metabolism and Renal Physiology 

Oral presentation: ”A model of Ca/Pi homeostasis in the Rat”.

Inselspital, Bern

23/03/16 - 24/03/16



### NCCR Kidney.CH Retreat 2016

Poster first author: ”Role of the bone rapidly exchangeable calcium pool in calcium homeostasis”.

Murten, Switzerland

25/02/16 - 27/02/16

### Société Francophone de Dialyse/Société de Néphrologie

Poster first author: ”Consequences of primary hyperparathyroidism on renal calcium excretion”.

Lyon, France

29/09/15 - 02/10/15



### Annual Franco-Swiss Meeting on Electrolytes Metabolism and Renal Physiology

Oral presentation: ”A Model of Calcium Homeostasis in the Rat”.

Centre de Recherche des Cordeliers, Paris

19/03/15 - 20/03/15


### Annual Franco-Swiss Meeting on Electrolytes Metabolism and Renal Physiology

Oral presentation: ”A Simplified Model of Plasma Calcium Regulation by PTH”.

CHUV, Lausanne

19/03/14 - 20/03/14


### Conference " In honour of Michael Mackey's 70th birthday

Oral presentation: ”Oscillatory dynamic during zebrafish somitogenesis”.

Lyon, France

3/06/13 - 6/06/13

Awards {data-icon=trophy}
--------------------------------------------------------------------------------

### 2021 RStudio Shiny Contest Judge
- Judge of the 2021 Shiny Contest.

N/A

Link: https://community.rstudio.com/t/commute-explorer-shiny-contest-submission/104651

2021

### 2020 RStudio Shiny Contest
- Runner-Up price: `{deminR}` a minesweeper for R.

N/A

Link: https://community.rstudio.com/t/deminr-a-minesweeper-for-r-2020-shiny-contest-submission/56356

2020

### 2019 RStudio Shiny Contest

- Runner-Up price: A Virtual Lab for Teaching Physiology.

N/A

Link: https://community.rstudio.com/t/shiny-contest-submission-a-virtual-lab-for-teaching-physiology/25348

2019


### NCCR Kidney.CH Retreat 2018

- Best Poster Award, 2nd price: A web-based application of Calcium and Phosphate Homeostasis.

N/A

N/A

2019


::: aside

This resume was made with the R package [**pagedown**](https://github.com/rstudio/pagedown).

Last updated on `r Sys.Date()`.

:::